Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 AL391280.1-201ENST00000506969 1062 ntBASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 OR10B1P-201ENST00000601666 907 ntBASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 AC244669.2-201ENST00000612320 853 ntBASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 AC131212.3-201ENST00000624087 4219 ntBASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HLA-DRB4X5D2U9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AC097359.2-201ENST00000604992 2389 ntBASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AC078819.1-201ENST00000547454 765 ntBASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AC012085.1-201ENST00000548270 765 ntBASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 RHOXF1P1-202ENST00000635473 501 ntBASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AC020910.5-201ENST00000623668 1865 ntBASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms