Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 BCL2L12P1-201ENST00000508390 733 ntBASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 MIR2278-201ENST00000516344 96 ntBASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 NRADDP-202ENST00000641269 1585 ntBASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDC42BPBQ9Y5S2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CDC42BPBQ9Y5S2 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC21.08■□□□□ 0.96
CDC42BPBQ9Y5S2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 NHP2P1-201ENST00000335274 462 ntBASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 SNU13-204ENST00000402458 462 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 KRT8P30-201ENST00000432100 650 ntBASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 HNRNPA1P10-201ENST00000444945 962 ntBASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 SERBP1P2-201ENST00000436888 1164 ntBASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 ACY3-202ENST00000529256 933 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 AL357143.1-203ENST00000639750 881 ntBASIC21.07■□□□□ 0.96
CDC42BPBQ9Y5S2 RCC2P1-201ENST00000452257 1476 ntBASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 FMO6P-201ENST00000236166 1620 ntBASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 CTBP2P6-201ENST00000526402 1229 ntBASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 MIR4254-201ENST00000581063 76 ntBASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42BPBQ9Y5S2 WASH7P-201ENST00000488147 1351 ntBASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 AC020910.6-201ENST00000623084 1459 ntBASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 CICP24-201ENST00000605464 2705 ntBASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42BPBQ9Y5S2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC041040.1-201ENST00000425197 460 ntBASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 RN7SL523P-201ENST00000484401 298 ntBASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 MED11-202ENST00000573708 802 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms