Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TIMMDC1Q9NPL8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AC010740.1-201ENST00000417035 684 ntBASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 FTH1P14-201ENST00000482930 551 ntBASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AC106760.1-201ENST00000508690 800 ntBASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 RN7SL121P-201ENST00000584223 273 ntBASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 AL645728.2-202ENST00000641679 227 ntBASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 KRT8P35-201ENST00000483942 1338 ntBASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 MSTO2P-201ENST00000314835 1709 ntBASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TIMMDC1Q9NPL8 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 AL645937.2-201ENST00000396808 931 ntBASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 AC007274.1-201ENST00000439805 662 ntBASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 RPL7P3-201ENST00000441388 714 ntBASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 SNX29P1-201ENST00000548357 1007 ntBASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 AC079316.1-201ENST00000548397 411 ntBASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 ADAM3B-201ENST00000569937 840 ntBASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TIMMDC1Q9NPL8 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms