Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHACTR1Q9C0D0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 AL132655.2-201ENST00000596276 594 ntBASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 Z99916.3-201ENST00000623422 1080 ntBASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.77□□□□□ -0.05
PHACTR1Q9C0D0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 TSPY16P-201ENST00000449843 468 ntBASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 UGT1A2P-201ENST00000454886 866 ntBASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 AL355385.1-201ENST00000606123 409 ntBASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 AC087386.2-201ENST00000623212 4637 ntBASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 PDIA3P1-201ENST00000471856 1510 ntBASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PHACTR1Q9C0D0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 AC114271.1-201ENST00000612689 2813 ntBASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PHACTR1Q9C0D0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms