Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
KRTAP4-3Q9BYR4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC4.93□□□□□ -1.62
KRTAP4-3Q9BYR4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-3Q9BYR4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC4.93□□□□□ -1.62
KRTAP4-3Q9BYR4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-3Q9BYR4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
KRTAP4-3Q9BYR4 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC4.93□□□□□ -1.62
KRTAP4-3Q9BYR4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-3Q9BYR4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
KRTAP4-3Q9BYR4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AC067931.2-201ENST00000623655 2003 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AC068587.6-202ENST00000641839 5619 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AC239868.1-201ENST00000369385 493 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AL583805.1-201ENST00000391389 531 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 STK33P1-201ENST00000423835 1218 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 MTND1P31-201ENST00000449206 961 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 ALG1L13P-202ENST00000519320 584 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 IQSEC3P1-201ENST00000538799 536 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AC135983.4-201ENST00000564116 1262 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 RN7SL190P-201ENST00000582519 257 ntBASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-3Q9BYR4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms