Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 AL022328.3-201ENST00000607943 679 ntBASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 AC244157.2-201ENST00000616239 1006 ntBASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 BX640514.1-201ENST00000583223 1918 ntBASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PCGF1Q9BSM1 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 AC018442.1-201ENST00000421439 2061 ntBASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 AC020910.5-201ENST00000623668 1865 ntBASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 RPSAP36-202ENST00000494591 1261 ntBASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.28□□□□□ -0.44
PCGF1Q9BSM1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 HSPA7-201ENST00000445535 1927 ntBASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.27□□□□□ -0.44
PCGF1Q9BSM1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AL136309.1-201ENST00000403917 691 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms