Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AC022144.1-201ENST00000602255 1580 ntBASIC14.17□□□□□ -0.14
EBF4Q9BQW3 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AL445250.1-201ENST00000641671 2259 ntBASIC14.16□□□□□ -0.14
EBF4Q9BQW3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 DNAJB3-202ENST00000449667 1266 ntBASIC14.16□□□□□ -0.14
EBF4Q9BQW3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC004890.2-204ENST00000481968 304 ntBASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AP005019.2-201ENST00000615104 511 ntBASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC004623.1-201ENST00000624592 2127 ntBASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC008761.3-201ENST00000624803 892 ntBASIC14.16□□□□□ -0.14
EBF4Q9BQW3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 AC007326.2-201ENST00000624224 7579 ntBASIC14.16□□□□□ -0.14
EBF4Q9BQW3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EBF4Q9BQW3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 AC009093.2-202ENST00000620513 2079 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 KRT8P28-201ENST00000433288 1390 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 SPDYE19P-201ENST00000338590 713 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 MYCLP2-201ENST00000449268 967 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 AC067863.1-201ENST00000494933 530 ntBASIC14.15□□□□□ -0.14
EBF4Q9BQW3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
EBF4Q9BQW3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms