Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
USB1Q9BQ65 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
USB1Q9BQ65 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 AC055811.4-201ENST00000624039 1754 ntBASIC13.22□□□□□ -0.29
USB1Q9BQ65 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
USB1Q9BQ65 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
USB1Q9BQ65 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
USB1Q9BQ65 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
USB1Q9BQ65 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
USB1Q9BQ65 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
USB1Q9BQ65 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
USB1Q9BQ65 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 DNM1P41-201ENST00000623634 3350 ntBASIC13.21□□□□□ -0.29
USB1Q9BQ65 C18orf15-201ENST00000623680 2534 ntBASIC13.21□□□□□ -0.29
USB1Q9BQ65 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 RANP7-201ENST00000418085 644 ntBASIC13.21□□□□□ -0.29
USB1Q9BQ65 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 HLA-K-203ENST00000430151 1046 ntBASIC13.21□□□□□ -0.29
USB1Q9BQ65 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.21□□□□□ -0.29
USB1Q9BQ65 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 AC022616.2-201ENST00000523185 300 ntBASIC13.21□□□□□ -0.29
USB1Q9BQ65 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 C2orf69P2-201ENST00000562032 1123 ntBASIC13.21□□□□□ -0.29
USB1Q9BQ65 RN7SL713P-201ENST00000582127 302 ntBASIC13.21□□□□□ -0.29
USB1Q9BQ65 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 AC093915.1-201ENST00000605740 1543 ntBASIC13.21□□□□□ -0.29
USB1Q9BQ65 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
USB1Q9BQ65 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.21□□□□□ -0.29
USB1Q9BQ65 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
USB1Q9BQ65 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
USB1Q9BQ65 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.3
USB1Q9BQ65 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
USB1Q9BQ65 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.21□□□□□ -0.3
USB1Q9BQ65 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
USB1Q9BQ65 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.21□□□□□ -0.3
USB1Q9BQ65 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.21□□□□□ -0.3
USB1Q9BQ65 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
USB1Q9BQ65 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
USB1Q9BQ65 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
USB1Q9BQ65 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
USB1Q9BQ65 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
USB1Q9BQ65 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
USB1Q9BQ65 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
USB1Q9BQ65 ST20-AS1-201ENST00000560255 4223 ntBASIC13.21□□□□□ -0.3
USB1Q9BQ65 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
USB1Q9BQ65 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.21□□□□□ -0.3
USB1Q9BQ65 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
USB1Q9BQ65 AC087386.2-201ENST00000623212 4637 ntBASIC13.2□□□□□ -0.3
USB1Q9BQ65 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USB1Q9BQ65 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms