Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 MSTO2P-201ENST00000314835 1709 ntBASIC12.5□□□□□ -0.41
GFI1Q99684 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
GFI1Q99684 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GFI1Q99684 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.5□□□□□ -0.41
GFI1Q99684 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 AC115284.2-201ENST00000624646 2054 ntBASIC12.5□□□□□ -0.41
GFI1Q99684 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.5□□□□□ -0.41
GFI1Q99684 CICP1-201ENST00000416803 2410 ntBASIC12.5□□□□□ -0.41
GFI1Q99684 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
GFI1Q99684 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
GFI1Q99684 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
GFI1Q99684 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GFI1Q99684 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFI1Q99684 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
GFI1Q99684 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
GFI1Q99684 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
GFI1Q99684 AC026271.4-201ENST00000578214 1833 ntBASIC12.49□□□□□ -0.41
GFI1Q99684 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
GFI1Q99684 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
GFI1Q99684 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.49□□□□□ -0.41
GFI1Q99684 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
GFI1Q99684 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.49□□□□□ -0.41
GFI1Q99684 AC123567.1-201ENST00000548294 1261 ntBASIC12.49□□□□□ -0.41
GFI1Q99684 AP001063.1-201ENST00000568332 529 ntBASIC12.49□□□□□ -0.41
GFI1Q99684 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.49□□□□□ -0.41
GFI1Q99684 AC133539.2-201ENST00000604757 467 ntBASIC12.49□□□□□ -0.41
GFI1Q99684 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.49□□□□□ -0.41
GFI1Q99684 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
GFI1Q99684 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.49□□□□□ -0.41
GFI1Q99684 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
GFI1Q99684 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.49□□□□□ -0.41
GFI1Q99684 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
GFI1Q99684 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFI1Q99684 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
GFI1Q99684 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
GFI1Q99684 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 DLX4-206ENST00000611342 1662 ntBASIC12.48□□□□□ -0.41
GFI1Q99684 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 AC024075.2-201ENST00000598112 1473 ntBASIC12.48□□□□□ -0.41
GFI1Q99684 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms