Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.06□□□□□ -0.48
S1PR3Q99500 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.06□□□□□ -0.48
S1PR3Q99500 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
S1PR3Q99500 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.06□□□□□ -0.48
S1PR3Q99500 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
S1PR3Q99500 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.05□□□□□ -0.48
S1PR3Q99500 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
S1PR3Q99500 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
S1PR3Q99500 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 AC215219.1-201ENST00000400706 1817 ntBASIC12.05□□□□□ -0.48
S1PR3Q99500 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.05□□□□□ -0.48
S1PR3Q99500 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.05□□□□□ -0.48
S1PR3Q99500 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
S1PR3Q99500 AC092933.1-201ENST00000393644 945 ntBASIC12.05□□□□□ -0.48
S1PR3Q99500 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.05□□□□□ -0.48
S1PR3Q99500 PUDPP3-201ENST00000445368 636 ntBASIC12.05□□□□□ -0.48
S1PR3Q99500 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.05□□□□□ -0.48
S1PR3Q99500 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
S1PR3Q99500 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.05□□□□□ -0.48
S1PR3Q99500 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.05□□□□□ -0.48
S1PR3Q99500 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.05□□□□□ -0.48
S1PR3Q99500 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.05□□□□□ -0.48
S1PR3Q99500 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.05□□□□□ -0.48
S1PR3Q99500 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
S1PR3Q99500 AC139712.1-201ENST00000378256 1875 ntBASIC12.05□□□□□ -0.48
S1PR3Q99500 AC020910.5-201ENST00000623668 1865 ntBASIC12.05□□□□□ -0.48
S1PR3Q99500 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
S1PR3Q99500 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.05□□□□□ -0.48
S1PR3Q99500 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
S1PR3Q99500 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.04□□□□□ -0.48
S1PR3Q99500 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
S1PR3Q99500 AC012617.1-204ENST00000586340 2305 ntBASIC12.04□□□□□ -0.48
S1PR3Q99500 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.04□□□□□ -0.48
S1PR3Q99500 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
S1PR3Q99500 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 AC020910.6-201ENST00000623084 1459 ntBASIC12.04□□□□□ -0.48
S1PR3Q99500 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
S1PR3Q99500 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
S1PR3Q99500 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms