Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 AC015922.1-201ENST00000421102 1152 ntBASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 HLA-K-203ENST00000430151 1046 ntBASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 AC009947.1-201ENST00000444350 727 ntBASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 AC004877.2-201ENST00000623941 599 ntBASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB3IPQ96QF0 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
RAB3IPQ96QF0 AC027369.3-201ENST00000530465 3707 ntBASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 AC134407.3-201ENST00000624035 2139 ntBASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 PI4KAP2-201ENST00000360806 2080 ntBASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 MIR346-201ENST00000362234 95 ntBASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 AL135744.1-201ENST00000565098 629 ntBASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 AP000842.3-202ENST00000569238 1080 ntBASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB3IPQ96QF0 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AC022400.8-201ENST00000623453 3599 ntBASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms