Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 AC105206.1-202ENST00000314927 2368 ntBASIC13.8□□□□□ -0.2
COL21A1Q96P44 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.8□□□□□ -0.2
COL21A1Q96P44 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL21A1Q96P44 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 AC015688.4-201ENST00000580780 1647 ntBASIC13.79□□□□□ -0.2
COL21A1Q96P44 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 INE2-201ENST00000630399 1874 ntBASIC13.79□□□□□ -0.2
COL21A1Q96P44 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 MIR1202-201ENST00000408529 83 ntBASIC13.79□□□□□ -0.2
COL21A1Q96P44 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 AC022210.1-201ENST00000449856 793 ntBASIC13.79□□□□□ -0.2
COL21A1Q96P44 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 AC131206.1-201ENST00000538078 1211 ntBASIC13.79□□□□□ -0.2
COL21A1Q96P44 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 SNX29P1-201ENST00000548357 1007 ntBASIC13.79□□□□□ -0.2
COL21A1Q96P44 AP005482.1-201ENST00000563722 1273 ntBASIC13.79□□□□□ -0.2
COL21A1Q96P44 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 MIR6775-201ENST00000617557 69 ntBASIC13.79□□□□□ -0.2
COL21A1Q96P44 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 AC027612.1-201ENST00000445234 2395 ntBASIC13.79□□□□□ -0.2
COL21A1Q96P44 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL21A1Q96P44 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.79□□□□□ -0.2
COL21A1Q96P44 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC099521.3-201ENST00000624251 2938 ntBASIC13.78□□□□□ -0.2
COL21A1Q96P44 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC130686.1-201ENST00000622936 2466 ntBASIC13.78□□□□□ -0.2
COL21A1Q96P44 ANKRD19P-201ENST00000338192 862 ntBASIC13.78□□□□□ -0.2
COL21A1Q96P44 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 MIR658-201ENST00000385210 100 ntBASIC13.78□□□□□ -0.2
COL21A1Q96P44 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 ATP5G2P4-201ENST00000442175 420 ntBASIC13.78□□□□□ -0.2
COL21A1Q96P44 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC023310.1-201ENST00000554836 735 ntBASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC106820.3-201ENST00000561653 397 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms