Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 ALG1L7P-201ENST00000502317 768 ntBASIC16.63■□□□□ 0.25
CDCA5Q96FF9 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.63■□□□□ 0.25
CDCA5Q96FF9 AC110057.1-201ENST00000636031 898 ntBASIC16.63■□□□□ 0.25
CDCA5Q96FF9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 AC008536.3-201ENST00000623282 1599 ntBASIC16.63■□□□□ 0.25
CDCA5Q96FF9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA5Q96FF9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AL157823.1-201ENST00000403727 628 ntBASIC16.62■□□□□ 0.25
CDCA5Q96FF9 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AC136604.1-202ENST00000425471 771 ntBASIC16.62■□□□□ 0.25
CDCA5Q96FF9 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 SOD2-205ENST00000444946 917 ntTSL 2 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 MIR2278-201ENST00000516344 96 ntBASIC16.62■□□□□ 0.25
CDCA5Q96FF9 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AC091304.3-201ENST00000566500 716 ntBASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AC132825.4-202ENST00000578792 434 ntBASIC16.62■□□□□ 0.25
CDCA5Q96FF9 MIR4254-201ENST00000581063 76 ntBASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AL031673.1-201ENST00000611460 466 ntBASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 AC026336.4-201ENST00000624565 1050 ntBASIC16.62■□□□□ 0.25
CDCA5Q96FF9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA5Q96FF9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.61■□□□□ 0.25
CDCA5Q96FF9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 MYADML-201ENST00000474610 2147 ntBASIC16.61■□□□□ 0.25
CDCA5Q96FF9 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA5Q96FF9 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms