Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC090643.2-201ENST00000623442 2029 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC092053.3-201ENST00000641308 4975 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC015909.5-201ENST00000624336 2266 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AL136172.1-201ENST00000598590 1394 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 HSPA8P5-201ENST00000456928 2069 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 MIR497HG-202ENST00000572453 3838 ntBASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AC011498.7-201ENST00000624986 2027 ntBASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 LRRC59-203ENST00000576448 1531 ntBASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AL603764.1-201ENST00000636452 321 ntBASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 AL591122.2-201ENST00000624125 1853 ntBASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.29□□□□□ -0.44
RTN4IP1Q8WWV3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 SALL4P5-201ENST00000419001 1760 ntBASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTN4IP1Q8WWV3 AC098614.1-201ENST00000368528 745 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms