Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 AL079307.3-201ENST00000556114 283 ntBASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 AL033527.5-202ENST00000641632 1098 ntBASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 AC026992.2-203ENST00000563004 2419 ntBASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DYNC2LI1Q8TCX1 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 AC069335.1-201ENST00000489972 472 ntBASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 AL121912.1-201ENST00000603683 238 ntBASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 Z83851.2-201ENST00000609564 659 ntBASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 AC055717.3-201ENST00000622967 595 ntBASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DYNC2LI1Q8TCX1 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms