Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 KHSRPP1-201ENST00000427983 1768 ntBASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 GIMAP3P-201ENST00000495150 836 ntBASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 AGAP10P-201ENST00000454844 2418 ntBASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3IL1Q8TBN0 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AC114812.1-204ENST00000449669 728 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 GCOM2-201ENST00000509133 1104 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 KRT18P8-201ENST00000581937 1246 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 LINC02084-201ENST00000606069 1096 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AL662799.1-202ENST00000614205 422 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AC093512.1-201ENST00000617969 520 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AP001002.3-201ENST00000623482 206 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AL138725.1-201ENST00000407347 1314 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 NUTM2HP-201ENST00000442076 2498 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 283.3 ms