Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 AQP7P5-201ENST00000428759 1049 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 AQP7P4-201ENST00000447083 1042 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 AQP7P2-201ENST00000453967 1041 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 CHCHD2P2-201ENST00000503744 321 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 IGHV1-12-201ENST00000518307 205 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 AC244250.3-201ENST00000620749 366 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 AQP7P3-201ENST00000624547 1041 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FAM90A21P-201ENST00000510875 1396 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FAM90A15P-201ENST00000514465 1395 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FAM90A6P-201ENST00000515148 1394 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FAM90A16P-201ENST00000526662 1395 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FAM90A9P-201ENST00000527940 1395 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FAM90A5P-201ENST00000528738 1395 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FAM90A14P-201ENST00000530386 1395 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 FAM90A13P-201ENST00000534703 1395 ntBASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS4Q8IUM7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 NORAD-201ENST00000565493 5339 ntBASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AC022447.6-201ENST00000515522 438 ntBASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS4Q8IUM7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS4Q8IUM7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.33■□□□□ 0.05
NPAS4Q8IUM7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS4Q8IUM7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS4Q8IUM7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS4Q8IUM7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
NPAS4Q8IUM7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
NPAS4Q8IUM7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS4Q8IUM7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS4Q8IUM7 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms