Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 CROCCP4-201ENST00000457096 498 ntBASIC13.45□□□□□ -0.26
VRK2Q86Y07 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.45□□□□□ -0.26
VRK2Q86Y07 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 C2orf69P2-201ENST00000562032 1123 ntBASIC13.45□□□□□ -0.26
VRK2Q86Y07 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 ZACNP1-201ENST00000612259 710 ntBASIC13.45□□□□□ -0.26
VRK2Q86Y07 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 LINC02486-201ENST00000604157 3000 ntBASIC13.45□□□□□ -0.26
VRK2Q86Y07 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AGAP10P-201ENST00000454844 2418 ntBASIC13.45□□□□□ -0.26
VRK2Q86Y07 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 AHCYP2-201ENST00000430630 1300 ntBASIC13.44□□□□□ -0.26
VRK2Q86Y07 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 KRT43P-201ENST00000434019 910 ntBASIC13.44□□□□□ -0.26
VRK2Q86Y07 CHMP1AP1-201ENST00000445563 662 ntBASIC13.44□□□□□ -0.26
VRK2Q86Y07 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 MIR3197-201ENST00000582241 73 ntBASIC13.44□□□□□ -0.26
VRK2Q86Y07 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 AC008825.2-201ENST00000603374 718 ntBASIC13.44□□□□□ -0.26
VRK2Q86Y07 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK2Q86Y07 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 SHC1P1-201ENST00000425230 1745 ntBASIC13.44□□□□□ -0.26
VRK2Q86Y07 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK2Q86Y07 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms