Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 AL023803.2-201ENST00000620080 638 ntBASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 AL008638.5-201ENST00000623814 1298 ntBASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LYSMD3Q7Z3D4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 RPL18P13-201ENST00000478088 569 ntBASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AL160314.3-201ENST00000556041 767 ntBASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AC005324.6-201ENST00000587972 613 ntBASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AC243960.2-201ENST00000600996 747 ntBASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AL022328.3-201ENST00000607943 679 ntBASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AC022748.3-201ENST00000621828 275 ntBASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 AC004899.1-201ENST00000424687 1714 ntBASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD3Q7Z3D4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AC020907.1-201ENST00000616460 1350 ntBASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD3Q7Z3D4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms