Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.92■□□□□ 0.62
USP31Q70CQ4 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP31Q70CQ4 AC087203.1-201ENST00000532111 1181 ntBASIC18.92■□□□□ 0.62
USP31Q70CQ4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
USP31Q70CQ4 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP31Q70CQ4 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP31Q70CQ4 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP31Q70CQ4 RPS5-204ENST00000598098 536 ntTSL 2 BASIC18.92■□□□□ 0.62
USP31Q70CQ4 PEBP1P2-201ENST00000603980 558 ntBASIC18.92■□□□□ 0.62
USP31Q70CQ4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP31Q70CQ4 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.92■□□□□ 0.62
USP31Q70CQ4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
USP31Q70CQ4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP31Q70CQ4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 AL109809.1-201ENST00000418979 1367 ntBASIC18.91■□□□□ 0.62
USP31Q70CQ4 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 ABCD1P4-201ENST00000399687 604 ntBASIC18.91■□□□□ 0.62
USP31Q70CQ4 MIR1301-201ENST00000408518 82 ntBASIC18.91■□□□□ 0.62
USP31Q70CQ4 ACTBP14-201ENST00000411655 1089 ntBASIC18.91■□□□□ 0.62
USP31Q70CQ4 KRT18P4-201ENST00000422599 1288 ntBASIC18.91■□□□□ 0.62
USP31Q70CQ4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 AC092862.1-201ENST00000541534 533 ntBASIC18.91■□□□□ 0.62
USP31Q70CQ4 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 HMGB1P24-201ENST00000611897 328 ntBASIC18.91■□□□□ 0.62
USP31Q70CQ4 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 ZNF436-AS1-201ENST00000335648 2547 ntBASIC18.91■□□□□ 0.62
USP31Q70CQ4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.91■□□□□ 0.62
USP31Q70CQ4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP31Q70CQ4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP31Q70CQ4 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 RN7SL128P-201ENST00000467883 305 ntBASIC18.9■□□□□ 0.62
USP31Q70CQ4 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 AC012158.2-201ENST00000536546 354 ntBASIC18.9■□□□□ 0.62
USP31Q70CQ4 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 AC006548.2-201ENST00000605217 529 ntBASIC18.9■□□□□ 0.62
USP31Q70CQ4 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms