Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 KRT8P12-202ENST00000472924 1397 ntBASIC12.8□□□□□ -0.36
C11orf88Q6PI97 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
C11orf88Q6PI97 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AC073548.1-201ENST00000624088 1882 ntBASIC12.79□□□□□ -0.36
C11orf88Q6PI97 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 KRT8P24-201ENST00000560290 1559 ntBASIC12.79□□□□□ -0.36
C11orf88Q6PI97 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 RPL37AP1-201ENST00000412502 279 ntBASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AL080243.2-201ENST00000418783 582 ntBASIC12.79□□□□□ -0.36
C11orf88Q6PI97 DFFBP1-201ENST00000433250 979 ntBASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AC093004.1-201ENST00000508850 424 ntBASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 MIR6069-201ENST00000620069 79 ntBASIC12.79□□□□□ -0.36
C11orf88Q6PI97 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AC016397.2-201ENST00000624848 1985 ntBASIC12.79□□□□□ -0.36
C11orf88Q6PI97 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AL118506.1-201ENST00000601296 3082 ntBASIC12.79□□□□□ -0.36
C11orf88Q6PI97 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf88Q6PI97 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.78□□□□□ -0.36
C11orf88Q6PI97 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
C11orf88Q6PI97 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms