Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AC139712.1-201ENST00000378256 1875 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AC215219.1-201ENST00000400706 1817 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AC005252.3-201ENST00000623855 2258 ntBASIC9.67□□□□□ -0.86
SYCNQ0VAF6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 STK40-201ENST00000359297 4837 ntTSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SYCNQ0VAF6 AL354989.2-201ENST00000435838 1540 ntBASIC9.66□□□□□ -0.86
SYCNQ0VAF6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AL359881.3-201ENST00000602640 1721 ntBASIC9.66□□□□□ -0.86
SYCNQ0VAF6 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 HMGN1P19-201ENST00000436976 333 ntBASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 INE1-201ENST00000456273 945 ntBASIC9.66□□□□□ -0.86
SYCNQ0VAF6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AC103988.2-201ENST00000561804 725 ntBASIC9.66□□□□□ -0.86
SYCNQ0VAF6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 BTNL10-201ENST00000595971 695 ntBASIC9.66□□□□□ -0.86
SYCNQ0VAF6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCNQ0VAF6 MVK-217ENST00000639206 367 ntTSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms