Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
CD47Q08722 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 C1QBPP1-201ENST00000400117 770 ntBASIC13.55□□□□□ -0.24
CD47Q08722 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 DFFBP1-201ENST00000433250 979 ntBASIC13.55□□□□□ -0.24
CD47Q08722 TSPY16P-201ENST00000449843 468 ntBASIC13.55□□□□□ -0.24
CD47Q08722 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.55□□□□□ -0.24
CD47Q08722 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.55□□□□□ -0.24
CD47Q08722 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 AC120045.2-201ENST00000567334 178 ntBASIC13.55□□□□□ -0.24
CD47Q08722 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.55□□□□□ -0.24
CD47Q08722 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 BRI3BPP1-201ENST00000594224 787 ntBASIC13.55□□□□□ -0.24
CD47Q08722 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.55□□□□□ -0.24
CD47Q08722 AC099568.2-201ENST00000609194 695 ntBASIC13.55□□□□□ -0.24
CD47Q08722 AC007431.3-201ENST00000623221 587 ntBASIC13.55□□□□□ -0.24
CD47Q08722 BX539320.1-201ENST00000623759 877 ntBASIC13.55□□□□□ -0.24
CD47Q08722 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
CD47Q08722 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
CD47Q08722 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 AC135782.3-201ENST00000562782 2105 ntBASIC13.55□□□□□ -0.24
CD47Q08722 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 AC007541.1-201ENST00000570282 1469 ntBASIC13.55□□□□□ -0.24
CD47Q08722 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 AL645937.2-201ENST00000396808 931 ntBASIC13.54□□□□□ -0.24
CD47Q08722 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.54□□□□□ -0.24
CD47Q08722 SPTLC1P1-201ENST00000447199 261 ntBASIC13.54□□□□□ -0.24
CD47Q08722 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.54□□□□□ -0.24
CD47Q08722 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.54□□□□□ -0.24
CD47Q08722 AC123567.1-201ENST00000548294 1261 ntBASIC13.54□□□□□ -0.24
CD47Q08722 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.54□□□□□ -0.24
CD47Q08722 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.54□□□□□ -0.24
CD47Q08722 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.54□□□□□ -0.24
CD47Q08722 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms