Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 MIR661-201ENST00000384842 89 ntBASIC13.83□□□□□ -0.2
CHRNB3Q05901 AL139094.1-201ENST00000405549 1188 ntBASIC13.83□□□□□ -0.2
CHRNB3Q05901 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 CRB3P1-201ENST00000449338 276 ntBASIC13.83□□□□□ -0.2
CHRNB3Q05901 AC009477.1-201ENST00000452936 217 ntBASIC13.83□□□□□ -0.2
CHRNB3Q05901 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 AC022616.1-201ENST00000518688 554 ntBASIC13.83□□□□□ -0.2
CHRNB3Q05901 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 PRSS30P-206ENST00000641773 873 ntBASIC13.83□□□□□ -0.2
CHRNB3Q05901 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 AC004241.5-201ENST00000623870 2448 ntBASIC13.83□□□□□ -0.2
CHRNB3Q05901 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRNB3Q05901 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CHRNB3Q05901 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 AL365181.3-201ENST00000605886 3222 ntBASIC13.82□□□□□ -0.2
CHRNB3Q05901 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 AC005034.1-201ENST00000426657 489 ntBASIC13.82□□□□□ -0.2
CHRNB3Q05901 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 BX539320.1-201ENST00000623759 877 ntBASIC13.82□□□□□ -0.2
CHRNB3Q05901 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRNB3Q05901 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.82□□□□□ -0.2
CHRNB3Q05901 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AC003102.2-201ENST00000589195 1469 ntBASIC13.81□□□□□ -0.2
CHRNB3Q05901 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms