Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
SSBP1Q04837 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
SSBP1Q04837 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP1Q04837 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SSBP1Q04837 AC009093.10-201ENST00000641956 1442 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 MEX3B-202ENST00000558133 4333 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 AC125807.2-201ENST00000513358 3514 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 AL445250.1-201ENST00000641671 2259 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 KLF2P2-201ENST00000416807 1039 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 GNAQP1-201ENST00000444815 1067 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 PUDPP3-201ENST00000445368 636 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP1Q04837 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP1Q04837 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.29□□□□□ -0.44
SSBP1Q04837 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 AC069262.1-201ENST00000539058 672 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP1Q04837 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP1Q04837 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP1Q04837 RARRES2P5-201ENST00000564013 466 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP1Q04837 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP1Q04837 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 AC073592.8-201ENST00000624126 511 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP1Q04837 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP1Q04837 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP1Q04837 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SSBP1Q04837 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP1Q04837 GHET1-201ENST00000627071 1906 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SSBP1Q04837 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP1Q04837 AC118758.2-201ENST00000614242 2813 ntBASIC12.29□□□□□ -0.44
SSBP1Q04837 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.28□□□□□ -0.44
SSBP1Q04837 AC073862.5-201ENST00000624129 2027 ntBASIC12.28□□□□□ -0.44
SSBP1Q04837 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SSBP1Q04837 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP1Q04837 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP1Q04837 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SSBP1Q04837 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.28□□□□□ -0.44
SSBP1Q04837 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.28□□□□□ -0.44
SSBP1Q04837 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
SSBP1Q04837 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SSBP1Q04837 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.28□□□□□ -0.44
SSBP1Q04837 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.28□□□□□ -0.44
SSBP1Q04837 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.28□□□□□ -0.44
SSBP1Q04837 YBX1P5-201ENST00000509441 847 ntBASIC12.28□□□□□ -0.44
SSBP1Q04837 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP1Q04837 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP1Q04837 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms