Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC20.77■□□□□ 0.92
ATP7AQ04656 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP7AQ04656 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC20.77■□□□□ 0.92
ATP7AQ04656 DUT-207ENST00000559416 635 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP7AQ04656 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP7AQ04656 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP7AQ04656 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC20.77■□□□□ 0.91
ATP7AQ04656 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP7AQ04656 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC20.77■□□□□ 0.91
ATP7AQ04656 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
ATP7AQ04656 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
ATP7AQ04656 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP7AQ04656 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ATP7AQ04656 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATP7AQ04656 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 AC064850.1-201ENST00000413279 1398 ntBASIC20.76■□□□□ 0.91
ATP7AQ04656 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
ATP7AQ04656 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP7AQ04656 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATP7AQ04656 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
ATP7AQ04656 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP7AQ04656 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP7AQ04656 RNU1-80P-201ENST00000459500 161 ntBASIC20.76■□□□□ 0.91
ATP7AQ04656 RN7SL684P-201ENST00000465665 294 ntBASIC20.76■□□□□ 0.91
ATP7AQ04656 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP7AQ04656 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP7AQ04656 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP7AQ04656 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP7AQ04656 CR392039.1-201ENST00000623217 204 ntBASIC20.76■□□□□ 0.91
ATP7AQ04656 AC245369.7-201ENST00000631386 350 ntBASIC20.76■□□□□ 0.91
ATP7AQ04656 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP7AQ04656 AL357143.1-203ENST00000639750 881 ntBASIC20.76■□□□□ 0.91
ATP7AQ04656 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP7AQ04656 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATP7AQ04656 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP7AQ04656 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
ATP7AQ04656 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP7AQ04656 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP7AQ04656 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ATP7AQ04656 KRT18P33-201ENST00000398525 1043 ntBASIC20.75■□□□□ 0.91
ATP7AQ04656 MPV17-209ENST00000405983 859 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP7AQ04656 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP7AQ04656 AL137244.1-201ENST00000422931 865 ntBASIC20.75■□□□□ 0.91
ATP7AQ04656 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC20.75■□□□□ 0.91
ATP7AQ04656 CTBP2P6-201ENST00000526402 1229 ntBASIC20.75■□□□□ 0.91
ATP7AQ04656 ACY3-202ENST00000529256 933 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP7AQ04656 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP7AQ04656 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP7AQ04656 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ATP7AQ04656 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ATP7AQ04656 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP7AQ04656 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP7AQ04656 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATP7AQ04656 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP7AQ04656 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP7AQ04656 HNRNPA1P10-201ENST00000444945 962 ntBASIC20.74■□□□□ 0.91
ATP7AQ04656 TREX1-203ENST00000456089 629 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP7AQ04656 AC004923.3-201ENST00000527532 355 ntBASIC20.74■□□□□ 0.91
ATP7AQ04656 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP7AQ04656 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP7AQ04656 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP7AQ04656 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATP7AQ04656 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ATP7AQ04656 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP7AQ04656 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP7AQ04656 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP7AQ04656 LILRP2-202ENST00000413572 1383 ntBASIC20.74■□□□□ 0.91
ATP7AQ04656 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP7AQ04656 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms