Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.72□□□□□ -0.21
RAE1P78406 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAE1P78406 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 MIR4259-201ENST00000584466 101 ntBASIC13.72□□□□□ -0.21
RAE1P78406 AC009884.2-201ENST00000603110 324 ntBASIC13.72□□□□□ -0.21
RAE1P78406 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.72□□□□□ -0.21
RAE1P78406 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.72□□□□□ -0.21
RAE1P78406 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.72□□□□□ -0.21
RAE1P78406 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 AC015909.5-201ENST00000624336 2266 ntBASIC13.71□□□□□ -0.21
RAE1P78406 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RAE1P78406 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.71□□□□□ -0.21
RAE1P78406 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
RAE1P78406 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.71□□□□□ -0.21
RAE1P78406 AC012441.2-201ENST00000444843 739 ntBASIC13.71□□□□□ -0.21
RAE1P78406 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 AC022217.1-201ENST00000521069 738 ntBASIC13.71□□□□□ -0.21
RAE1P78406 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.71□□□□□ -0.21
RAE1P78406 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.71□□□□□ -0.21
RAE1P78406 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.71□□□□□ -0.21
RAE1P78406 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.71□□□□□ -0.21
RAE1P78406 AC090386.2-201ENST00000623010 1039 ntBASIC13.71□□□□□ -0.21
RAE1P78406 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.71□□□□□ -0.21
RAE1P78406 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAE1P78406 CCT8L1P-201ENST00000465400 1674 ntBASIC13.71□□□□□ -0.21
RAE1P78406 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.71□□□□□ -0.21
RAE1P78406 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RAE1P78406 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAE1P78406 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAE1P78406 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAE1P78406 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAE1P78406 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAE1P78406 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAE1P78406 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAE1P78406 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAE1P78406 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
RAE1P78406 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.7□□□□□ -0.22
RAE1P78406 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAE1P78406 KRT18P36-201ENST00000411618 1276 ntBASIC13.7□□□□□ -0.22
RAE1P78406 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAE1P78406 FAM58BP-201ENST00000439056 645 ntBASIC13.7□□□□□ -0.22
RAE1P78406 HSPB1P2-201ENST00000448722 546 ntBASIC13.7□□□□□ -0.22
RAE1P78406 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.7□□□□□ -0.22
RAE1P78406 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms