Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.82□□□□□ -0.2
SKP1P63208 AC144522.1-201ENST00000625111 1658 ntBASIC13.82□□□□□ -0.2
SKP1P63208 SNX18-202ENST00000343017 3140 ntBASIC13.82□□□□□ -0.2
SKP1P63208 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.82□□□□□ -0.2
SKP1P63208 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.82□□□□□ -0.2
SKP1P63208 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SKP1P63208 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.82□□□□□ -0.2
SKP1P63208 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SKP1P63208 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SKP1P63208 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.82□□□□□ -0.2
SKP1P63208 AC011742.3-201ENST00000439053 820 ntBASIC13.82□□□□□ -0.2
SKP1P63208 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.82□□□□□ -0.2
SKP1P63208 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.82□□□□□ -0.2
SKP1P63208 RNMTL1P1-201ENST00000454103 560 ntBASIC13.82□□□□□ -0.2
SKP1P63208 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.82□□□□□ -0.2
SKP1P63208 AC006122.1-201ENST00000493323 440 ntBASIC13.82□□□□□ -0.2
SKP1P63208 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.82□□□□□ -0.2
SKP1P63208 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.82□□□□□ -0.2
SKP1P63208 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.82□□□□□ -0.2
SKP1P63208 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.82□□□□□ -0.2
SKP1P63208 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.82□□□□□ -0.2
SKP1P63208 AC015656.1-201ENST00000624209 3578 ntBASIC13.82□□□□□ -0.2
SKP1P63208 AC140479.7-201ENST00000636301 2332 ntBASIC13.82□□□□□ -0.2
SKP1P63208 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
SKP1P63208 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SKP1P63208 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.82□□□□□ -0.2
SKP1P63208 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SKP1P63208 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SKP1P63208 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 AC215219.1-201ENST00000400706 1817 ntBASIC13.81□□□□□ -0.2
SKP1P63208 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.81□□□□□ -0.2
SKP1P63208 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.81□□□□□ -0.2
SKP1P63208 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.81□□□□□ -0.2
SKP1P63208 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.81□□□□□ -0.2
SKP1P63208 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.81□□□□□ -0.2
SKP1P63208 KRT8P13-201ENST00000463294 1010 ntBASIC13.81□□□□□ -0.2
SKP1P63208 RPL18P13-201ENST00000478088 569 ntBASIC13.81□□□□□ -0.2
SKP1P63208 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.81□□□□□ -0.2
SKP1P63208 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.81□□□□□ -0.2
SKP1P63208 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.81□□□□□ -0.2
SKP1P63208 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.81□□□□□ -0.2
SKP1P63208 AC090164.2-201ENST00000611487 516 ntBASIC13.81□□□□□ -0.2
SKP1P63208 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.81□□□□□ -0.2
SKP1P63208 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.81□□□□□ -0.2
SKP1P63208 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 AC064801.2-201ENST00000625052 1303 ntBASIC13.81□□□□□ -0.2
SKP1P63208 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SKP1P63208 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SKP1P63208 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SKP1P63208 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SKP1P63208 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SKP1P63208 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SKP1P63208 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.8□□□□□ -0.2
SKP1P63208 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms