Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.41□□□□□ -0.74
UBE2D3P61077 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 FAM207CP-201ENST00000443486 507 ntBASIC10.41□□□□□ -0.74
UBE2D3P61077 TSPY16P-201ENST00000449843 468 ntBASIC10.41□□□□□ -0.74
UBE2D3P61077 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
UBE2D3P61077 GCOM2-201ENST00000509133 1104 ntBASIC10.41□□□□□ -0.74
UBE2D3P61077 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D3P61077 AC004466.1-201ENST00000599515 1080 ntBASIC10.41□□□□□ -0.74
UBE2D3P61077 GPALPP1-207ENST00000611650 899 ntBASIC10.41□□□□□ -0.74
UBE2D3P61077 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 TCAM1P-207ENST00000485295 1537 ntBASIC10.41□□□□□ -0.74
UBE2D3P61077 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D3P61077 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D3P61077 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
UBE2D3P61077 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
UBE2D3P61077 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
UBE2D3P61077 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D3P61077 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.41□□□□□ -0.74
UBE2D3P61077 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.74
UBE2D3P61077 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D3P61077 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D3P61077 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
UBE2D3P61077 AC215219.1-201ENST00000400706 1817 ntBASIC10.4□□□□□ -0.74
UBE2D3P61077 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC10.4□□□□□ -0.74
UBE2D3P61077 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D3P61077 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D3P61077 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
UBE2D3P61077 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 RN7SKP230-201ENST00000365642 335 ntBASIC10.4□□□□□ -0.74
UBE2D3P61077 APOA1-205ENST00000375329 927 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D3P61077 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC10.4□□□□□ -0.74
UBE2D3P61077 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC10.4□□□□□ -0.74
UBE2D3P61077 AC245100.3-201ENST00000441281 285 ntBASIC10.4□□□□□ -0.74
UBE2D3P61077 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 AC093433.1-201ENST00000458048 571 ntBASIC10.4□□□□□ -0.74
UBE2D3P61077 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC10.4□□□□□ -0.74
UBE2D3P61077 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC10.4□□□□□ -0.74
UBE2D3P61077 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
UBE2D3P61077 PAM16-204ENST00000571941 674 ntTSL 3 BASIC10.4□□□□□ -0.74
UBE2D3P61077 AC138696.2-201ENST00000607376 223 ntBASIC10.4□□□□□ -0.74
UBE2D3P61077 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
UBE2D3P61077 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC10.4□□□□□ -0.74
UBE2D3P61077 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D3P61077 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms