Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.92□□□□□ -0.5
SPCS3P61009 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 MIR943-201ENST00000401286 94 ntBASIC11.92□□□□□ -0.5
SPCS3P61009 AC134915.1-201ENST00000426461 574 ntBASIC11.92□□□□□ -0.5
SPCS3P61009 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 AP000347.1-202ENST00000435868 847 ntBASIC11.92□□□□□ -0.5
SPCS3P61009 DNAJB3-202ENST00000449667 1266 ntBASIC11.92□□□□□ -0.5
SPCS3P61009 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.92□□□□□ -0.5
SPCS3P61009 SPDYE18-201ENST00000510091 1050 ntBASIC11.92□□□□□ -0.5
SPCS3P61009 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.92□□□□□ -0.5
SPCS3P61009 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.92□□□□□ -0.5
SPCS3P61009 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
SPCS3P61009 RRP7BP-205ENST00000566851 833 ntBASIC11.92□□□□□ -0.5
SPCS3P61009 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
SPCS3P61009 BRI3BPP1-201ENST00000594224 787 ntBASIC11.92□□□□□ -0.5
SPCS3P61009 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.92□□□□□ -0.5
SPCS3P61009 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SPCS3P61009 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.92□□□□□ -0.5
SPCS3P61009 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SPCS3P61009 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.92□□□□□ -0.5
SPCS3P61009 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SPCS3P61009 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SPCS3P61009 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SPCS3P61009 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SPCS3P61009 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.91□□□□□ -0.5
SPCS3P61009 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 INTS4P2-202ENST00000614726 2019 ntBASIC11.91□□□□□ -0.5
SPCS3P61009 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.91□□□□□ -0.5
SPCS3P61009 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SPCS3P61009 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 AC130686.1-201ENST00000622936 2466 ntBASIC11.91□□□□□ -0.5
SPCS3P61009 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.91□□□□□ -0.5
SPCS3P61009 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.91□□□□□ -0.5
SPCS3P61009 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.91□□□□□ -0.5
SPCS3P61009 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.91□□□□□ -0.5
SPCS3P61009 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.91□□□□□ -0.5
SPCS3P61009 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.91□□□□□ -0.5
SPCS3P61009 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.91□□□□□ -0.5
SPCS3P61009 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.91□□□□□ -0.5
SPCS3P61009 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.91□□□□□ -0.5
SPCS3P61009 TPRX2P-201ENST00000535362 881 ntBASIC11.91□□□□□ -0.5
SPCS3P61009 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 AC120045.2-201ENST00000567334 178 ntBASIC11.91□□□□□ -0.5
SPCS3P61009 AL390955.2-201ENST00000603032 514 ntBASIC11.91□□□□□ -0.5
SPCS3P61009 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.91□□□□□ -0.5
SPCS3P61009 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SPCS3P61009 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.91□□□□□ -0.5
SPCS3P61009 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms