Protein–RNA interactions for Protein: P57682

KLF3, Krueppel-like factor 3, humanhuman

Predicted RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3P57682 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
KLF3P57682 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
KLF3P57682 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.52□□□□□ -0.41
KLF3P57682 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.52□□□□□ -0.41
KLF3P57682 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KLF3P57682 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.52□□□□□ -0.41
KLF3P57682 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.52□□□□□ -0.41
KLF3P57682 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
KLF3P57682 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KLF3P57682 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
KLF3P57682 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KLF3P57682 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
KLF3P57682 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
KLF3P57682 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
KLF3P57682 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
KLF3P57682 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 DPM3-202ENST00000368399 517 ntBASIC12.51□□□□□ -0.41
KLF3P57682 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.51□□□□□ -0.41
KLF3P57682 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.51□□□□□ -0.41
KLF3P57682 AC006122.1-201ENST00000493323 440 ntBASIC12.51□□□□□ -0.41
KLF3P57682 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
KLF3P57682 AL160314.3-201ENST00000556041 767 ntBASIC12.51□□□□□ -0.41
KLF3P57682 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.51□□□□□ -0.41
KLF3P57682 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.51□□□□□ -0.41
KLF3P57682 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 AL451050.2-201ENST00000606967 682 ntBASIC12.51□□□□□ -0.41
KLF3P57682 MIR6074-201ENST00000612054 107 ntBASIC12.51□□□□□ -0.41
KLF3P57682 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.51□□□□□ -0.41
KLF3P57682 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.51□□□□□ -0.41
KLF3P57682 AC068587.8-201ENST00000641239 219 ntBASIC12.51□□□□□ -0.41
KLF3P57682 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 TMBIM7P-202ENST00000641474 1516 ntBASIC12.51□□□□□ -0.41
KLF3P57682 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.51□□□□□ -0.41
KLF3P57682 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
KLF3P57682 AC144522.1-201ENST00000625111 1658 ntBASIC12.51□□□□□ -0.41
KLF3P57682 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.51□□□□□ -0.41
KLF3P57682 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KLF3P57682 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
KLF3P57682 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.5□□□□□ -0.41
KLF3P57682 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
KLF3P57682 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.5□□□□□ -0.41
KLF3P57682 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.5□□□□□ -0.41
KLF3P57682 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.5□□□□□ -0.41
KLF3P57682 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.5□□□□□ -0.41
KLF3P57682 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.5□□□□□ -0.41
KLF3P57682 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
KLF3P57682 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
KLF3P57682 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.5□□□□□ -0.41
KLF3P57682 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
KLF3P57682 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.5□□□□□ -0.41
KLF3P57682 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.5□□□□□ -0.41
KLF3P57682 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KLF3P57682 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms