Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN12P56749 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
CLDN12P56749 AC139712.1-201ENST00000378256 1875 ntBASIC12.68□□□□□ -0.38
CLDN12P56749 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN12P56749 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
CLDN12P56749 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN12P56749 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CLDN12P56749 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CLDN12P56749 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 KLF2P2-201ENST00000416807 1039 ntBASIC12.68□□□□□ -0.38
CLDN12P56749 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN12P56749 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.68□□□□□ -0.38
CLDN12P56749 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN12P56749 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN12P56749 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN12P56749 AC135586.1-201ENST00000539323 574 ntBASIC12.68□□□□□ -0.38
CLDN12P56749 SORD2P-201ENST00000558556 1069 ntBASIC12.68□□□□□ -0.38
CLDN12P56749 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN12P56749 SNHG9-202ENST00000564014 471 ntBASIC12.68□□□□□ -0.38
CLDN12P56749 AC009407.1-201ENST00000568958 598 ntBASIC12.68□□□□□ -0.38
CLDN12P56749 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN12P56749 AC007431.3-201ENST00000623221 587 ntBASIC12.68□□□□□ -0.38
CLDN12P56749 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLDN12P56749 AL139385.1-201ENST00000611744 3272 ntBASIC12.68□□□□□ -0.38
CLDN12P56749 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN12P56749 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN12P56749 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN12P56749 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN12P56749 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN12P56749 AL731571.1-201ENST00000617058 5428 ntBASIC12.68□□□□□ -0.38
CLDN12P56749 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLDN12P56749 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN12P56749 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN12P56749 LRRC59-203ENST00000576448 1531 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CLDN12P56749 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 AL138725.1-201ENST00000407347 1314 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CLDN12P56749 BTBD7P1-201ENST00000447253 1453 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 LINC00567-201ENST00000569854 3409 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLDN12P56749 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 CR383656.2-201ENST00000548656 2254 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 BEND3P3-201ENST00000611030 2440 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 KHSRPP1-201ENST00000427983 1768 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN12P56749 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLDN12P56749 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN12P56749 BX842568.4-201ENST00000421222 227 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 TSEN15P1-201ENST00000423257 515 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLDN12P56749 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 AC009477.1-201ENST00000452936 217 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.67□□□□□ -0.38
CLDN12P56749 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.67□□□□□ -0.38
CLDN12P56749 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 AC103988.2-201ENST00000561804 725 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDN12P56749 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.67□□□□□ -0.38
CLDN12P56749 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN12P56749 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDN12P56749 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDN12P56749 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CLDN12P56749 AC004840.1-201ENST00000636359 365 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms