Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC10.64□□□□□ -0.71
APOC4P55056 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC10.64□□□□□ -0.71
APOC4P55056 AC008723.1-201ENST00000506922 207 ntBASIC10.64□□□□□ -0.71
APOC4P55056 AC022447.6-201ENST00000515522 438 ntBASIC10.64□□□□□ -0.71
APOC4P55056 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC10.64□□□□□ -0.71
APOC4P55056 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC10.64□□□□□ -0.71
APOC4P55056 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 AC092299.1-201ENST00000632679 757 ntBASIC10.64□□□□□ -0.71
APOC4P55056 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 FGD5P1-202ENST00000614866 2498 ntBASIC10.64□□□□□ -0.71
APOC4P55056 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 CYP4F23P-201ENST00000593402 1579 ntBASIC10.64□□□□□ -0.71
APOC4P55056 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
APOC4P55056 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 PTPRVP-205ENST00000641549 5067 ntBASIC10.63□□□□□ -0.71
APOC4P55056 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC10.63□□□□□ -0.71
APOC4P55056 PTPA-217ENST00000434095 870 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC10.63□□□□□ -0.71
APOC4P55056 TSACC-208ENST00000481479 741 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC10.63□□□□□ -0.71
APOC4P55056 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC10.63□□□□□ -0.71
APOC4P55056 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 SORD2P-201ENST00000558556 1069 ntBASIC10.63□□□□□ -0.71
APOC4P55056 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 FGFR3P5-201ENST00000564496 886 ntBASIC10.63□□□□□ -0.71
APOC4P55056 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 AL353770.1-201ENST00000614915 403 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms