Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLK1P49759 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
CLK1P49759 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLK1P49759 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLK1P49759 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.77□□□□□ -0.21
CLK1P49759 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CLK1P49759 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLK1P49759 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.77□□□□□ -0.21
CLK1P49759 DGCR5-201ENST00000399539 862 ntBASIC13.77□□□□□ -0.21
CLK1P49759 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 AL139094.1-201ENST00000405549 1188 ntBASIC13.77□□□□□ -0.21
CLK1P49759 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.77□□□□□ -0.21
CLK1P49759 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.77□□□□□ -0.21
CLK1P49759 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.77□□□□□ -0.21
CLK1P49759 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.77□□□□□ -0.21
CLK1P49759 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLK1P49759 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLK1P49759 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.77□□□□□ -0.21
CLK1P49759 CU634019.7-201ENST00000624153 1185 ntBASIC13.77□□□□□ -0.21
CLK1P49759 FP236241.2-201ENST00000624906 1185 ntBASIC13.77□□□□□ -0.21
CLK1P49759 AC025048.6-201ENST00000634326 1161 ntBASIC13.77□□□□□ -0.21
CLK1P49759 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.77□□□□□ -0.21
CLK1P49759 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.77□□□□□ -0.21
CLK1P49759 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 AC118758.2-201ENST00000614242 2813 ntBASIC13.77□□□□□ -0.21
CLK1P49759 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.77□□□□□ -0.21
CLK1P49759 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLK1P49759 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLK1P49759 NUTM2HP-201ENST00000442076 2498 ntBASIC13.76□□□□□ -0.21
CLK1P49759 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.76□□□□□ -0.21
CLK1P49759 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.76□□□□□ -0.21
CLK1P49759 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.76□□□□□ -0.21
CLK1P49759 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.76□□□□□ -0.21
CLK1P49759 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLK1P49759 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.76□□□□□ -0.21
CLK1P49759 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.76□□□□□ -0.21
CLK1P49759 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 KRT18P25-201ENST00000508931 1278 ntBASIC13.76□□□□□ -0.21
CLK1P49759 AP001582.1-201ENST00000525856 295 ntBASIC13.76□□□□□ -0.21
CLK1P49759 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CLK1P49759 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.76□□□□□ -0.21
CLK1P49759 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.76□□□□□ -0.21
CLK1P49759 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.76□□□□□ -0.21
CLK1P49759 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.76□□□□□ -0.21
CLK1P49759 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.76□□□□□ -0.21
CLK1P49759 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.76□□□□□ -0.21
CLK1P49759 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLK1P49759 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.76□□□□□ -0.21
CLK1P49759 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 AL591122.2-201ENST00000624125 1853 ntBASIC13.76□□□□□ -0.21
CLK1P49759 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CLK1P49759 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.76□□□□□ -0.21
CLK1P49759 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLK1P49759 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms