Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 OR3A1-202ENST00000615105 966 ntBASIC16.07■□□□□ 0.16
TM4SF4P48230 AC009041.4-201ENST00000620075 638 ntBASIC16.07■□□□□ 0.16
TM4SF4P48230 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.07■□□□□ 0.16
TM4SF4P48230 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TM4SF4P48230 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 AC018442.1-201ENST00000421439 2061 ntBASIC16.07■□□□□ 0.16
TM4SF4P48230 AC232323.1-201ENST00000540724 2099 ntBASIC16.07■□□□□ 0.16
TM4SF4P48230 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TM4SF4P48230 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TM4SF4P48230 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TM4SF4P48230 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TM4SF4P48230 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TM4SF4P48230 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM4SF4P48230 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.06■□□□□ 0.16
TM4SF4P48230 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM4SF4P48230 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.06■□□□□ 0.16
TM4SF4P48230 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.06■□□□□ 0.16
TM4SF4P48230 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
TM4SF4P48230 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TM4SF4P48230 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM4SF4P48230 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TM4SF4P48230 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.06■□□□□ 0.16
TM4SF4P48230 AC000077.1-201ENST00000420012 953 ntBASIC16.06■□□□□ 0.16
TM4SF4P48230 PGK1P2-201ENST00000431702 1214 ntBASIC16.06■□□□□ 0.16
TM4SF4P48230 HNRNPA3P12-201ENST00000437410 1063 ntBASIC16.06■□□□□ 0.16
TM4SF4P48230 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.06■□□□□ 0.16
TM4SF4P48230 PSME2P2-201ENST00000453033 700 ntBASIC16.06■□□□□ 0.16
TM4SF4P48230 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC16.06■□□□□ 0.16
TM4SF4P48230 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC16.06■□□□□ 0.16
TM4SF4P48230 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.06■□□□□ 0.16
TM4SF4P48230 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC16.06■□□□□ 0.16
TM4SF4P48230 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC16.06■□□□□ 0.16
TM4SF4P48230 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 KF455155.1-201ENST00000604493 303 ntBASIC16.06■□□□□ 0.16
TM4SF4P48230 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TM4SF4P48230 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM4SF4P48230 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM4SF4P48230 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.06■□□□□ 0.16
TM4SF4P48230 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TM4SF4P48230 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TM4SF4P48230 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.05■□□□□ 0.16
TM4SF4P48230 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TM4SF4P48230 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.05■□□□□ 0.16
TM4SF4P48230 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TM4SF4P48230 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 FTH1P18-201ENST00000412071 549 ntBASIC16.05■□□□□ 0.16
TM4SF4P48230 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.05■□□□□ 0.16
TM4SF4P48230 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC16.05■□□□□ 0.16
TM4SF4P48230 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC16.05■□□□□ 0.16
TM4SF4P48230 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC16.05■□□□□ 0.16
TM4SF4P48230 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC16.05■□□□□ 0.16
TM4SF4P48230 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC16.05■□□□□ 0.16
TM4SF4P48230 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC16.05■□□□□ 0.16
TM4SF4P48230 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC16.05■□□□□ 0.16
TM4SF4P48230 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC16.05■□□□□ 0.16
TM4SF4P48230 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC16.05■□□□□ 0.16
TM4SF4P48230 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC16.05■□□□□ 0.16
TM4SF4P48230 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC16.05■□□□□ 0.16
TM4SF4P48230 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC16.05■□□□□ 0.16
TM4SF4P48230 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TM4SF4P48230 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM4SF4P48230 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.05■□□□□ 0.16
TM4SF4P48230 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.05■□□□□ 0.16
TM4SF4P48230 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms