Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.57■□□□□ 0.08
SSR1P43307 ACTG1P3-201ENST00000431775 1114 ntBASIC15.57■□□□□ 0.08
SSR1P43307 AL355864.2-201ENST00000447420 863 ntBASIC15.57■□□□□ 0.08
SSR1P43307 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.57■□□□□ 0.08
SSR1P43307 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
SSR1P43307 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SSR1P43307 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.57■□□□□ 0.08
SSR1P43307 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.57■□□□□ 0.08
SSR1P43307 MIR5189-201ENST00000577370 114 ntBASIC15.57■□□□□ 0.08
SSR1P43307 AC092364.2-202ENST00000597012 1073 ntBASIC15.57■□□□□ 0.08
SSR1P43307 ENPP7P14-201ENST00000621765 1040 ntBASIC15.57■□□□□ 0.08
SSR1P43307 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SSR1P43307 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSR1P43307 AL138725.1-201ENST00000407347 1314 ntBASIC15.57■□□□□ 0.08
SSR1P43307 FKBP4P6-201ENST00000457486 1332 ntBASIC15.57■□□□□ 0.08
SSR1P43307 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.57■□□□□ 0.08
SSR1P43307 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.57■□□□□ 0.08
SSR1P43307 DGCR9-201ENST00000609630 2415 ntBASIC15.57■□□□□ 0.08
SSR1P43307 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SSR1P43307 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSR1P43307 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSR1P43307 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.57■□□□□ 0.08
SSR1P43307 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
SSR1P43307 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SSR1P43307 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SSR1P43307 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSR1P43307 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSR1P43307 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SSR1P43307 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SSR1P43307 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.56■□□□□ 0.08
SSR1P43307 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SSR1P43307 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SSR1P43307 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SSR1P43307 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SSR1P43307 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 TPM3P8-201ENST00000330554 643 ntBASIC15.56■□□□□ 0.08
SSR1P43307 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SSR1P43307 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SSR1P43307 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SSR1P43307 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.56■□□□□ 0.08
SSR1P43307 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SSR1P43307 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SSR1P43307 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.56■□□□□ 0.08
SSR1P43307 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SSR1P43307 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.56■□□□□ 0.08
SSR1P43307 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.56■□□□□ 0.08
SSR1P43307 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SSR1P43307 INE2-201ENST00000630399 1874 ntBASIC15.56■□□□□ 0.08
SSR1P43307 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SSR1P43307 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SSR1P43307 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SSR1P43307 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SSR1P43307 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.55■□□□□ 0.08
SSR1P43307 MYADML-201ENST00000474610 2147 ntBASIC15.55■□□□□ 0.08
SSR1P43307 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SSR1P43307 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
SSR1P43307 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.55■□□□□ 0.08
SSR1P43307 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SSR1P43307 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.55■□□□□ 0.08
SSR1P43307 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SSR1P43307 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSR1P43307 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms