Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CDKN1AP38936 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CDKN1AP38936 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
CDKN1AP38936 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CDKN1AP38936 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDKN1AP38936 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CDKN1AP38936 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.44□□□□□ -0.42
CDKN1AP38936 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.44□□□□□ -0.42
CDKN1AP38936 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.44□□□□□ -0.42
CDKN1AP38936 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.44□□□□□ -0.42
CDKN1AP38936 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.44□□□□□ -0.42
CDKN1AP38936 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CDKN1AP38936 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.44□□□□□ -0.42
CDKN1AP38936 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.44□□□□□ -0.42
CDKN1AP38936 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.44□□□□□ -0.42
CDKN1AP38936 AC026803.1-201ENST00000569130 274 ntBASIC12.44□□□□□ -0.42
CDKN1AP38936 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 AC018635.2-201ENST00000608625 364 ntBASIC12.44□□□□□ -0.42
CDKN1AP38936 AP003419.4-201ENST00000616071 517 ntBASIC12.44□□□□□ -0.42
CDKN1AP38936 MIR6769A-201ENST00000617340 73 ntBASIC12.44□□□□□ -0.42
CDKN1AP38936 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.44□□□□□ -0.42
CDKN1AP38936 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDKN1AP38936 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.44□□□□□ -0.42
CDKN1AP38936 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 CICP23-201ENST00000605013 2741 ntBASIC12.44□□□□□ -0.42
CDKN1AP38936 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
CDKN1AP38936 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDKN1AP38936 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.44□□□□□ -0.42
CDKN1AP38936 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDKN1AP38936 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CDKN1AP38936 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CDKN1AP38936 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CDKN1AP38936 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CDKN1AP38936 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
CDKN1AP38936 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.43□□□□□ -0.42
CDKN1AP38936 TMBIM7P-202ENST00000641474 1516 ntBASIC12.43□□□□□ -0.42
CDKN1AP38936 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 AC018629.1-201ENST00000623381 1736 ntBASIC12.43□□□□□ -0.42
CDKN1AP38936 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.43□□□□□ -0.42
CDKN1AP38936 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 AP000356.3-201ENST00000382243 753 ntBASIC12.43□□□□□ -0.42
CDKN1AP38936 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 AC026316.1-201ENST00000398900 414 ntBASIC12.43□□□□□ -0.42
CDKN1AP38936 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.43□□□□□ -0.42
CDKN1AP38936 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.43□□□□□ -0.42
CDKN1AP38936 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.43□□□□□ -0.42
CDKN1AP38936 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
CDKN1AP38936 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.43□□□□□ -0.42
CDKN1AP38936 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.43□□□□□ -0.42
CDKN1AP38936 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.43□□□□□ -0.42
CDKN1AP38936 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.43□□□□□ -0.42
CDKN1AP38936 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.43□□□□□ -0.42
CDKN1AP38936 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.43□□□□□ -0.42
CDKN1AP38936 MEG3_2.1-201ENST00000611456 105 ntBASIC12.43□□□□□ -0.42
CDKN1AP38936 COX6A1P2-201ENST00000620597 330 ntBASIC12.43□□□□□ -0.42
CDKN1AP38936 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.43□□□□□ -0.42
CDKN1AP38936 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.43□□□□□ -0.42
CDKN1AP38936 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
CDKN1AP38936 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDKN1AP38936 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.43□□□□□ -0.42
CDKN1AP38936 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms