Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 PTPN20CP-201ENST00000614090 920 ntBASIC14.07□□□□□ -0.16
HOXA6P31267 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.07□□□□□ -0.16
HOXA6P31267 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.07□□□□□ -0.16
HOXA6P31267 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXA6P31267 AC117503.4-201ENST00000623229 1418 ntBASIC14.07□□□□□ -0.16
HOXA6P31267 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
HOXA6P31267 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.06□□□□□ -0.16
HOXA6P31267 KRT8P43-201ENST00000406052 1458 ntBASIC14.06□□□□□ -0.16
HOXA6P31267 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.06□□□□□ -0.16
HOXA6P31267 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.06□□□□□ -0.16
HOXA6P31267 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HOXA6P31267 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HOXA6P31267 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.06□□□□□ -0.16
HOXA6P31267 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.06□□□□□ -0.16
HOXA6P31267 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.06□□□□□ -0.16
HOXA6P31267 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 BRI3P1-201ENST00000440440 378 ntBASIC14.06□□□□□ -0.16
HOXA6P31267 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.06□□□□□ -0.16
HOXA6P31267 KRT18P15-201ENST00000458108 1291 ntBASIC14.06□□□□□ -0.16
HOXA6P31267 COQ10BP2-201ENST00000513804 724 ntBASIC14.06□□□□□ -0.16
HOXA6P31267 AC092612.1-201ENST00000514501 998 ntBASIC14.06□□□□□ -0.16
HOXA6P31267 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 AC004801.1-201ENST00000549557 360 ntBASIC14.06□□□□□ -0.16
HOXA6P31267 RN7SL121P-201ENST00000584223 273 ntBASIC14.06□□□□□ -0.16
HOXA6P31267 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.06□□□□□ -0.16
HOXA6P31267 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.06□□□□□ -0.16
HOXA6P31267 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HOXA6P31267 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.06□□□□□ -0.16
HOXA6P31267 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXA6P31267 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXA6P31267 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.05□□□□□ -0.16
HOXA6P31267 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HOXA6P31267 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.05□□□□□ -0.16
HOXA6P31267 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.05□□□□□ -0.16
HOXA6P31267 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
HOXA6P31267 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HOXA6P31267 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXA6P31267 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 SIRPB3P-201ENST00000340424 1216 ntBASIC14.05□□□□□ -0.16
HOXA6P31267 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HOXA6P31267 AC022080.1-201ENST00000366255 781 ntBASIC14.05□□□□□ -0.16
HOXA6P31267 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXA6P31267 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.05□□□□□ -0.16
HOXA6P31267 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXA6P31267 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.05□□□□□ -0.16
HOXA6P31267 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.05□□□□□ -0.16
HOXA6P31267 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.05□□□□□ -0.16
HOXA6P31267 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXA6P31267 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.05□□□□□ -0.16
HOXA6P31267 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms