Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
ATP6V0CP27449 AC004623.1-201ENST00000624592 2127 ntBASIC11.64□□□□□ -0.55
ATP6V0CP27449 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.64□□□□□ -0.55
ATP6V0CP27449 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.64□□□□□ -0.55
ATP6V0CP27449 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.64□□□□□ -0.55
ATP6V0CP27449 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.64□□□□□ -0.55
ATP6V0CP27449 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
ATP6V0CP27449 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
ATP6V0CP27449 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
ATP6V0CP27449 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
ATP6V0CP27449 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ATP6V0CP27449 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ATP6V0CP27449 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
ATP6V0CP27449 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ATP6V0CP27449 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
ATP6V0CP27449 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
ATP6V0CP27449 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ATP6V0CP27449 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.63□□□□□ -0.55
ATP6V0CP27449 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 AC026271.4-201ENST00000578214 1833 ntBASIC11.63□□□□□ -0.55
ATP6V0CP27449 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 CETN4P-206ENST00000642099 2168 ntBASIC11.63□□□□□ -0.55
ATP6V0CP27449 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 MRPL3P1-201ENST00000400109 1033 ntBASIC11.63□□□□□ -0.55
ATP6V0CP27449 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 AC026434.2-201ENST00000506094 1078 ntBASIC11.63□□□□□ -0.55
ATP6V0CP27449 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 AC131206.1-201ENST00000538078 1211 ntBASIC11.63□□□□□ -0.55
ATP6V0CP27449 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 AC103988.2-201ENST00000561804 725 ntBASIC11.63□□□□□ -0.55
ATP6V0CP27449 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 AL022313.4-201ENST00000562756 2046 ntBASIC11.63□□□□□ -0.55
ATP6V0CP27449 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ATP6V0CP27449 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ATP6V0CP27449 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.62□□□□□ -0.55
ATP6V0CP27449 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.62□□□□□ -0.55
ATP6V0CP27449 AL138799.1-201ENST00000448213 1675 ntBASIC11.62□□□□□ -0.55
ATP6V0CP27449 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ATP6V0CP27449 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ATP6V0CP27449 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ATP6V0CP27449 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ATP6V0CP27449 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ATP6V0CP27449 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ATP6V0CP27449 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ATP6V0CP27449 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ATP6V0CP27449 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ATP6V0CP27449 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ATP6V0CP27449 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms