Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.27□□□□□ -0.45
COL8A2P25067 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
COL8A2P25067 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.27□□□□□ -0.45
COL8A2P25067 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.27□□□□□ -0.45
COL8A2P25067 AL596276.2-201ENST00000447525 331 ntBASIC12.27□□□□□ -0.45
COL8A2P25067 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.27□□□□□ -0.45
COL8A2P25067 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.27□□□□□ -0.45
COL8A2P25067 RNA5SP423-201ENST00000517127 109 ntBASIC12.27□□□□□ -0.45
COL8A2P25067 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.27□□□□□ -0.45
COL8A2P25067 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.27□□□□□ -0.45
COL8A2P25067 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.27□□□□□ -0.45
COL8A2P25067 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.27□□□□□ -0.45
COL8A2P25067 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.27□□□□□ -0.45
COL8A2P25067 AC020922.3-201ENST00000595064 547 ntBASIC12.27□□□□□ -0.45
COL8A2P25067 AL157813.1-201ENST00000612996 587 ntBASIC12.27□□□□□ -0.45
COL8A2P25067 AC079336.7-201ENST00000623428 1078 ntBASIC12.27□□□□□ -0.45
COL8A2P25067 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COL8A2P25067 AC018629.1-201ENST00000623381 1736 ntBASIC12.27□□□□□ -0.45
COL8A2P25067 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.27□□□□□ -0.45
COL8A2P25067 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COL8A2P25067 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.27□□□□□ -0.45
COL8A2P25067 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
COL8A2P25067 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COL8A2P25067 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.27□□□□□ -0.45
COL8A2P25067 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL8A2P25067 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.27□□□□□ -0.45
COL8A2P25067 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
COL8A2P25067 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.27□□□□□ -0.45
COL8A2P25067 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.27□□□□□ -0.45
COL8A2P25067 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
COL8A2P25067 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 AC239868.1-201ENST00000369385 493 ntBASIC12.26□□□□□ -0.45
COL8A2P25067 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 PDIA3P2-201ENST00000428073 158 ntBASIC12.26□□□□□ -0.45
COL8A2P25067 AC073150.1-201ENST00000450406 1084 ntBASIC12.26□□□□□ -0.45
COL8A2P25067 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.26□□□□□ -0.45
COL8A2P25067 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.26□□□□□ -0.45
COL8A2P25067 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.26□□□□□ -0.45
COL8A2P25067 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.26□□□□□ -0.45
COL8A2P25067 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.26□□□□□ -0.45
COL8A2P25067 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 AL133499.1-201ENST00000596207 608 ntBASIC12.26□□□□□ -0.45
COL8A2P25067 AC016629.1-201ENST00000596579 586 ntBASIC12.26□□□□□ -0.45
COL8A2P25067 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 AC015967.2-201ENST00000624092 234 ntBASIC12.26□□□□□ -0.45
COL8A2P25067 AC006435.4-201ENST00000625037 234 ntBASIC12.26□□□□□ -0.45
COL8A2P25067 AL356737.1-201ENST00000634391 234 ntBASIC12.26□□□□□ -0.45
COL8A2P25067 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms