Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.14□□□□□ -0.31
PPP3CBP16298 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 AP000593.2-201ENST00000542775 1433 ntBASIC13.14□□□□□ -0.31
PPP3CBP16298 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PPP3CBP16298 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.14□□□□□ -0.31
PPP3CBP16298 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.14□□□□□ -0.31
PPP3CBP16298 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.14□□□□□ -0.31
PPP3CBP16298 BCYRN1-201ENST00000418539 200 ntBASIC13.14□□□□□ -0.31
PPP3CBP16298 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 SCARNA20.5-201ENST00000516991 142 ntBASIC13.14□□□□□ -0.31
PPP3CBP16298 AC126915.1-201ENST00000522847 1038 ntBASIC13.14□□□□□ -0.31
PPP3CBP16298 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.14□□□□□ -0.31
PPP3CBP16298 AC020914.3-201ENST00000594712 304 ntBASIC13.14□□□□□ -0.31
PPP3CBP16298 AL096828.3-201ENST00000615354 462 ntBASIC13.14□□□□□ -0.31
PPP3CBP16298 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PPP3CBP16298 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 AC138028.6-201ENST00000616106 1482 ntBASIC13.14□□□□□ -0.31
PPP3CBP16298 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PPP3CBP16298 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.14□□□□□ -0.31
PPP3CBP16298 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.14□□□□□ -0.31
PPP3CBP16298 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PPP3CBP16298 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 AC011474.4-201ENST00000623523 2076 ntBASIC13.14□□□□□ -0.31
PPP3CBP16298 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.14□□□□□ -0.31
PPP3CBP16298 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PPP3CBP16298 FKBP4P6-201ENST00000457486 1332 ntBASIC13.13□□□□□ -0.31
PPP3CBP16298 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.13□□□□□ -0.31
PPP3CBP16298 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.13□□□□□ -0.31
PPP3CBP16298 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PPP3CBP16298 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.13□□□□□ -0.31
PPP3CBP16298 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 KRT8P4-201ENST00000509735 1454 ntBASIC13.13□□□□□ -0.31
PPP3CBP16298 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 CALR4P-201ENST00000431943 946 ntBASIC13.13□□□□□ -0.31
PPP3CBP16298 CHMP1AP1-201ENST00000445563 662 ntBASIC13.13□□□□□ -0.31
PPP3CBP16298 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.13□□□□□ -0.31
PPP3CBP16298 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 AL023803.2-201ENST00000620080 638 ntBASIC13.13□□□□□ -0.31
PPP3CBP16298 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.13□□□□□ -0.31
PPP3CBP16298 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
PPP3CBP16298 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PPP3CBP16298 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
PPP3CBP16298 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.13□□□□□ -0.31
PPP3CBP16298 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.13□□□□□ -0.31
PPP3CBP16298 AC005562.1-201ENST00000583030 3219 ntBASIC13.13□□□□□ -0.31
PPP3CBP16298 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PPP3CBP16298 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms