Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 AC006483.2-201ENST00000609813 515 ntBASIC16.03■□□□□ 0.16
COL11A1P12107 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
COL11A1P12107 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 RN7SL494P-201ENST00000461517 304 ntBASIC16.03■□□□□ 0.16
COL11A1P12107 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.03■□□□□ 0.16
COL11A1P12107 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.03■□□□□ 0.16
COL11A1P12107 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 AC055811.3-201ENST00000584952 686 ntBASIC16.03■□□□□ 0.16
COL11A1P12107 AL139424.3-202ENST00000641619 917 ntBASIC16.03■□□□□ 0.16
COL11A1P12107 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
COL11A1P12107 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
COL11A1P12107 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL11A1P12107 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
COL11A1P12107 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
COL11A1P12107 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.02■□□□□ 0.16
COL11A1P12107 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.02■□□□□ 0.16
COL11A1P12107 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.02■□□□□ 0.16
COL11A1P12107 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.02■□□□□ 0.16
COL11A1P12107 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL11A1P12107 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.02■□□□□ 0.15
COL11A1P12107 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.02■□□□□ 0.15
COL11A1P12107 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL11A1P12107 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
COL11A1P12107 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
COL11A1P12107 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL11A1P12107 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL11A1P12107 AC106881.1-201ENST00000605849 3329 ntBASIC16.02■□□□□ 0.15
COL11A1P12107 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL11A1P12107 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL11A1P12107 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.02■□□□□ 0.15
COL11A1P12107 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL11A1P12107 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL11A1P12107 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.02■□□□□ 0.15
COL11A1P12107 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.01■□□□□ 0.15
COL11A1P12107 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
COL11A1P12107 PSAT1P2-201ENST00000426107 972 ntBASIC16.01■□□□□ 0.15
COL11A1P12107 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.01■□□□□ 0.15
COL11A1P12107 GOLGA2P7-209ENST00000560408 745 ntBASIC16.01■□□□□ 0.15
COL11A1P12107 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.01■□□□□ 0.15
COL11A1P12107 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.01■□□□□ 0.15
COL11A1P12107 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.01■□□□□ 0.15
COL11A1P12107 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.01■□□□□ 0.15
COL11A1P12107 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.01■□□□□ 0.15
COL11A1P12107 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.01■□□□□ 0.15
COL11A1P12107 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL11A1P12107 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms