Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SFTPBP07988 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SFTPBP07988 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SFTPBP07988 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SFTPBP07988 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SFTPBP07988 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SFTPBP07988 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.73□□□□□ -0.37
SFTPBP07988 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
SFTPBP07988 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SFTPBP07988 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 AC011474.4-201ENST00000623523 2076 ntBASIC12.73□□□□□ -0.37
SFTPBP07988 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 ARSEP1-201ENST00000420443 635 ntBASIC12.73□□□□□ -0.37
SFTPBP07988 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 EIF3FP3-201ENST00000434851 1086 ntBASIC12.73□□□□□ -0.37
SFTPBP07988 ATP5G2P4-201ENST00000442175 420 ntBASIC12.73□□□□□ -0.37
SFTPBP07988 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SFTPBP07988 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SFTPBP07988 TDH-203ENST00000531764 1110 ntBASIC12.73□□□□□ -0.37
SFTPBP07988 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.73□□□□□ -0.37
SFTPBP07988 RAB43P1-201ENST00000561790 589 ntBASIC12.73□□□□□ -0.37
SFTPBP07988 MIR5189-201ENST00000577370 114 ntBASIC12.73□□□□□ -0.37
SFTPBP07988 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SFTPBP07988 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.73□□□□□ -0.37
SFTPBP07988 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.73□□□□□ -0.37
SFTPBP07988 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SFTPBP07988 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SFTPBP07988 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.73□□□□□ -0.37
SFTPBP07988 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SFTPBP07988 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.73□□□□□ -0.37
SFTPBP07988 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SFTPBP07988 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SFTPBP07988 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.72□□□□□ -0.37
SFTPBP07988 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
SFTPBP07988 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SFTPBP07988 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms