Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
OPN1SWP03999 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.62□□□□□ -0.23
OPN1SWP03999 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.62□□□□□ -0.23
OPN1SWP03999 PUDPP3-201ENST00000445368 636 ntBASIC13.62□□□□□ -0.23
OPN1SWP03999 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.62□□□□□ -0.23
OPN1SWP03999 FTLP10-202ENST00000505798 471 ntBASIC13.62□□□□□ -0.23
OPN1SWP03999 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.62□□□□□ -0.23
OPN1SWP03999 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.62□□□□□ -0.23
OPN1SWP03999 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.62□□□□□ -0.23
OPN1SWP03999 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.62□□□□□ -0.23
OPN1SWP03999 LINC02560-201ENST00000596379 459 ntBASIC13.62□□□□□ -0.23
OPN1SWP03999 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.62□□□□□ -0.23
OPN1SWP03999 AL033527.5-201ENST00000641382 801 ntBASIC13.62□□□□□ -0.23
OPN1SWP03999 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
OPN1SWP03999 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
OPN1SWP03999 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.62□□□□□ -0.23
OPN1SWP03999 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
OPN1SWP03999 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
OPN1SWP03999 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.61□□□□□ -0.23
OPN1SWP03999 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.61□□□□□ -0.23
OPN1SWP03999 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.61□□□□□ -0.23
OPN1SWP03999 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
OPN1SWP03999 AC012441.1-201ENST00000446669 685 ntBASIC13.61□□□□□ -0.23
OPN1SWP03999 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.61□□□□□ -0.23
OPN1SWP03999 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
OPN1SWP03999 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
OPN1SWP03999 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.61□□□□□ -0.23
OPN1SWP03999 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.61□□□□□ -0.23
OPN1SWP03999 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.61□□□□□ -0.23
OPN1SWP03999 AC140912.1-201ENST00000577171 1054 ntBASIC13.61□□□□□ -0.23
OPN1SWP03999 AJ011932.1-201ENST00000621707 465 ntBASIC13.61□□□□□ -0.23
OPN1SWP03999 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
OPN1SWP03999 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
OPN1SWP03999 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
OPN1SWP03999 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
OPN1SWP03999 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.61□□□□□ -0.23
OPN1SWP03999 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.61□□□□□ -0.23
OPN1SWP03999 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
OPN1SWP03999 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
OPN1SWP03999 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.61□□□□□ -0.23
OPN1SWP03999 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
OPN1SWP03999 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.61□□□□□ -0.23
OPN1SWP03999 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
OPN1SWP03999 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
OPN1SWP03999 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
OPN1SWP03999 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
OPN1SWP03999 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
OPN1SWP03999 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
OPN1SWP03999 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
OPN1SWP03999 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms