Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 PGR-210ENST00000619228 3038 ntTSL 5 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 MIR339-201ENST00000362153 94 ntBASIC21.09■□□□□ 0.97
RAPGEF3O95398 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 BX088651.3-201ENST00000418155 352 ntBASIC21.09■□□□□ 0.97
RAPGEF3O95398 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 YY1P2-201ENST00000438766 948 ntBASIC21.09■□□□□ 0.97
RAPGEF3O95398 RN7SL838P-201ENST00000481676 295 ntBASIC21.09■□□□□ 0.97
RAPGEF3O95398 GYG1-209ENST00000483267 801 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 AC112250.1-201ENST00000504640 745 ntBASIC21.09■□□□□ 0.97
RAPGEF3O95398 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 AL512310.5-201ENST00000551999 515 ntBASIC21.09■□□□□ 0.97
RAPGEF3O95398 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 MIR8071-1-201ENST00000616769 65 ntBASIC21.09■□□□□ 0.97
RAPGEF3O95398 MIR8071-2-201ENST00000616772 65 ntBASIC21.09■□□□□ 0.97
RAPGEF3O95398 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC21.09■□□□□ 0.97
RAPGEF3O95398 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF3O95398 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RAPGEF3O95398 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF3O95398 AL162727.3-201ENST00000635661 2787 ntBASIC21.08■□□□□ 0.97
RAPGEF3O95398 MYADML-201ENST00000474610 2147 ntBASIC21.08■□□□□ 0.97
RAPGEF3O95398 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF3O95398 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF3O95398 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF3O95398 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF3O95398 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF3O95398 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 NAT9-219ENST00000582524 573 ntTSL 4 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF3O95398 AC123912.6-201ENST00000612657 315 ntBASIC21.08■□□□□ 0.97
RAPGEF3O95398 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC21.08■□□□□ 0.97
RAPGEF3O95398 AC138627.1-201ENST00000641127 1257 ntBASIC21.08■□□□□ 0.97
RAPGEF3O95398 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RAPGEF3O95398 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF3O95398 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC21.08■□□□□ 0.96
RAPGEF3O95398 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF3O95398 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF3O95398 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF3O95398 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF3O95398 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC21.08■□□□□ 0.96
RAPGEF3O95398 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF3O95398 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.08■□□□□ 0.96
RAPGEF3O95398 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 SAP18P2-201ENST00000434334 459 ntBASIC21.07■□□□□ 0.96
RAPGEF3O95398 FAM86JP-202ENST00000484500 988 ntBASIC21.07■□□□□ 0.96
RAPGEF3O95398 RNA5SP420-201ENST00000516997 137 ntBASIC21.07■□□□□ 0.96
RAPGEF3O95398 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 AC120498.5-201ENST00000561757 299 ntBASIC21.07■□□□□ 0.96
RAPGEF3O95398 CDC37P2-201ENST00000562287 1029 ntBASIC21.07■□□□□ 0.96
RAPGEF3O95398 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.07■□□□□ 0.96
RAPGEF3O95398 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms