Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TRIM3O75382 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM3O75382 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
TRIM3O75382 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 PPT1-213ENST00000641319 2388 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.63□□□□□ -0.23
TRIM3O75382 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 BTBD6P1-201ENST00000412176 1267 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 AC079178.1-201ENST00000420915 656 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.63□□□□□ -0.23
TRIM3O75382 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRIM3O75382 MTX1P1-201ENST00000440904 838 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.63□□□□□ -0.23
TRIM3O75382 RPSAP36-202ENST00000494591 1261 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM3O75382 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.63□□□□□ -0.23
TRIM3O75382 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRIM3O75382 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM3O75382 MIR4538-201ENST00000581377 78 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 RN7SL219P-201ENST00000582872 296 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM3O75382 AC244157.2-201ENST00000616239 1006 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 MIR6869-201ENST00000619434 62 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.63□□□□□ -0.23
TRIM3O75382 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 AC018442.1-201ENST00000421439 2061 ntBASIC13.63□□□□□ -0.23
TRIM3O75382 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
TRIM3O75382 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRIM3O75382 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRIM3O75382 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TRIM3O75382 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
TRIM3O75382 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM3O75382 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM3O75382 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 COL6A4P2-202ENST00000504443 2753 ntBASIC13.62□□□□□ -0.23
TRIM3O75382 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM3O75382 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRIM3O75382 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM3O75382 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms