Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSI1O43347 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
MSI1O43347 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
MSI1O43347 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.05■□□□□ -0
MSI1O43347 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.05■□□□□ -0
MSI1O43347 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.05■□□□□ -0
MSI1O43347 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.05■□□□□ -0
MSI1O43347 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
MSI1O43347 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSI1O43347 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
MSI1O43347 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSI1O43347 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSI1O43347 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
MSI1O43347 AC007191.1-201ENST00000623179 2995 ntBASIC15.05■□□□□ -0
MSI1O43347 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSI1O43347 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.05■□□□□ -0
MSI1O43347 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.05■□□□□ -0
MSI1O43347 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
MSI1O43347 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.04■□□□□ -0
MSI1O43347 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.04■□□□□ -0
MSI1O43347 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
MSI1O43347 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MSI1O43347 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.04■□□□□ -0
MSI1O43347 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.04■□□□□ -0
MSI1O43347 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.04■□□□□ -0
MSI1O43347 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.04■□□□□ -0
MSI1O43347 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.04■□□□□ -0
MSI1O43347 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
MSI1O43347 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MSI1O43347 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.04■□□□□ -0
MSI1O43347 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
MSI1O43347 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.04■□□□□ -0
MSI1O43347 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSI1O43347 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MSI1O43347 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
MSI1O43347 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.04■□□□□ -0
MSI1O43347 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MSI1O43347 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
MSI1O43347 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.03■□□□□ -0
MSI1O43347 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
MSI1O43347 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.03■□□□□ -0
MSI1O43347 GRK6P1-201ENST00000400595 1711 ntBASIC15.03■□□□□ -0
MSI1O43347 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MSI1O43347 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MSI1O43347 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 LINC01165-201ENST00000445190 1623 ntBASIC15.03■□□□□ -0
MSI1O43347 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.03■□□□□ -0
MSI1O43347 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
MSI1O43347 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.03■□□□□ -0
MSI1O43347 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 LINC01230-201ENST00000625222 3017 ntBASIC15.03■□□□□ -0
MSI1O43347 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
MSI1O43347 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MSI1O43347 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.03■□□□□ -0
MSI1O43347 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.03■□□□□ -0
MSI1O43347 SLC25A24P2-201ENST00000415059 510 ntBASIC15.03■□□□□ -0
MSI1O43347 AL008707.1-201ENST00000422498 534 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms