Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN5O00501 RN7SL277P-201ENST00000481521 288 ntBASIC15.25■□□□□ 0.03
CLDN5O00501 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 AC116345.2-201ENST00000512837 523 ntBASIC15.25■□□□□ 0.03
CLDN5O00501 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN5O00501 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.25■□□□□ 0.03
CLDN5O00501 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.25■□□□□ 0.03
CLDN5O00501 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN5O00501 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.25■□□□□ 0.03
CLDN5O00501 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 AC090386.2-201ENST00000623010 1039 ntBASIC15.25■□□□□ 0.03
CLDN5O00501 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN5O00501 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN5O00501 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 LINC01230-201ENST00000625222 3017 ntBASIC15.25■□□□□ 0.03
CLDN5O00501 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLDN5O00501 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN5O00501 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN5O00501 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 AC068418.2-201ENST00000577309 3703 ntBASIC15.25■□□□□ 0.03
CLDN5O00501 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLDN5O00501 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN5O00501 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLDN5O00501 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CLDN5O00501 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN5O00501 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN5O00501 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN5O00501 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.24■□□□□ 0.03
CLDN5O00501 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 MIR3188-201ENST00000583494 85 ntBASIC15.24■□□□□ 0.03
CLDN5O00501 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN5O00501 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN5O00501 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN5O00501 AL109837.1-201ENST00000603272 613 ntBASIC15.24■□□□□ 0.03
CLDN5O00501 AL606495.2-201ENST00000605867 535 ntBASIC15.24■□□□□ 0.03
CLDN5O00501 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN5O00501 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLDN5O00501 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN5O00501 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 AL022313.4-201ENST00000562756 2046 ntBASIC15.24■□□□□ 0.03
CLDN5O00501 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN5O00501 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN5O00501 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLDN5O00501 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLDN5O00501 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN5O00501 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLDN5O00501 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLDN5O00501 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN5O00501 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN5O00501 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN5O00501 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN5O00501 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN5O00501 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN5O00501 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN5O00501 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms