Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.5■□□□□ 0.07
O00370 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.5■□□□□ 0.07
O00370 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
O00370 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
O00370 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
O00370 AC011474.4-201ENST00000623523 2076 ntBASIC15.5■□□□□ 0.07
O00370 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
O00370 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
O00370 KRT8P29-201ENST00000420409 1371 ntBASIC15.49■□□□□ 0.07
O00370 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.49■□□□□ 0.07
O00370 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.49■□□□□ 0.07
O00370 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.49■□□□□ 0.07
O00370 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.49■□□□□ 0.07
O00370 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.49■□□□□ 0.07
O00370 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
O00370 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.49■□□□□ 0.07
O00370 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
O00370 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.49■□□□□ 0.07
O00370 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
O00370 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.49■□□□□ 0.07
O00370 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
O00370 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
O00370 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.49■□□□□ 0.07
O00370 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.49■□□□□ 0.07
O00370 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.49■□□□□ 0.07
O00370 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.49■□□□□ 0.07
O00370 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.49■□□□□ 0.07
O00370 POM121L10P-201ENST00000436994 1285 ntBASIC15.49■□□□□ 0.07
O00370 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.49■□□□□ 0.07
O00370 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.49■□□□□ 0.07
O00370 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.49■□□□□ 0.07
O00370 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.49■□□□□ 0.07
O00370 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.49■□□□□ 0.07
O00370 AC005324.6-201ENST00000587972 613 ntBASIC15.49■□□□□ 0.07
O00370 AC091271.1-201ENST00000611877 1162 ntBASIC15.49■□□□□ 0.07
O00370 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.49■□□□□ 0.07
O00370 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.49■□□□□ 0.07
O00370 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.49■□□□□ 0.07
O00370 TCAF1P1-201ENST00000414990 2232 ntBASIC15.49■□□□□ 0.07
O00370 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
O00370 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.49■□□□□ 0.07
O00370 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
O00370 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
O00370 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.49■□□□□ 0.07
O00370 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
O00370 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
O00370 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.48■□□□□ 0.07
O00370 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
O00370 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
O00370 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
O00370 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.48■□□□□ 0.07
O00370 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.48■□□□□ 0.07
O00370 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
O00370 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
O00370 ACTBP11-201ENST00000436287 1126 ntBASIC15.48■□□□□ 0.07
O00370 TUBB8P8-201ENST00000458717 1058 ntBASIC15.48■□□□□ 0.07
O00370 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
O00370 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.48■□□□□ 0.07
O00370 AC005962.1-201ENST00000584100 773 ntBASIC15.48■□□□□ 0.07
O00370 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.48■□□□□ 0.07
O00370 AC009884.2-201ENST00000603110 324 ntBASIC15.48■□□□□ 0.07
O00370 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 AC022748.3-201ENST00000621828 275 ntBASIC15.48■□□□□ 0.07
O00370 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.48■□□□□ 0.07
O00370 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
O00370 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms