Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 MIR600HG-201ENST00000449175 5984 ntBASIC13.78□□□□□ -0.2
UPK1AO00322 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UPK1AO00322 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.77□□□□□ -0.2
UPK1AO00322 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.77□□□□□ -0.2
UPK1AO00322 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.77□□□□□ -0.2
UPK1AO00322 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.77□□□□□ -0.2
UPK1AO00322 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK1AO00322 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK1AO00322 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK1AO00322 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
UPK1AO00322 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.77□□□□□ -0.21
UPK1AO00322 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 AL136309.1-201ENST00000403917 691 ntBASIC13.77□□□□□ -0.21
UPK1AO00322 BOLA2P3-201ENST00000404566 256 ntBASIC13.77□□□□□ -0.21
UPK1AO00322 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.77□□□□□ -0.21
UPK1AO00322 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.77□□□□□ -0.21
UPK1AO00322 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.77□□□□□ -0.21
UPK1AO00322 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.77□□□□□ -0.21
UPK1AO00322 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.77□□□□□ -0.21
UPK1AO00322 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.77□□□□□ -0.21
UPK1AO00322 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK1AO00322 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.77□□□□□ -0.21
UPK1AO00322 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 AL512343.1-201ENST00000605837 169 ntBASIC13.77□□□□□ -0.21
UPK1AO00322 AL358472.3-201ENST00000608147 415 ntBASIC13.77□□□□□ -0.21
UPK1AO00322 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.77□□□□□ -0.21
UPK1AO00322 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.77□□□□□ -0.21
UPK1AO00322 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK1AO00322 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK1AO00322 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK1AO00322 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UPK1AO00322 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1AO00322 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1AO00322 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1AO00322 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UPK1AO00322 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 KRT8P4-201ENST00000509735 1454 ntBASIC13.76□□□□□ -0.21
UPK1AO00322 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1AO00322 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1AO00322 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.76□□□□□ -0.21
UPK1AO00322 AC112492.5-201ENST00000421897 457 ntBASIC13.76□□□□□ -0.21
UPK1AO00322 U91328.1-201ENST00000437528 223 ntBASIC13.76□□□□□ -0.21
UPK1AO00322 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.76□□□□□ -0.21
UPK1AO00322 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.76□□□□□ -0.21
UPK1AO00322 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms